Docker and security fixes

This commit is contained in:
Carlos Felix 2025-01-23 09:24:02 -05:00
parent 6093ce0f53
commit 40973b9393
24 changed files with 264 additions and 316 deletions

View file

@ -25,7 +25,7 @@ on:
jobs:
analyze:
name: Analyze
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
permissions:
actions: read
contents: read

View file

@ -7,7 +7,7 @@ on:
jobs:
build:
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
steps:
- name: Checkout Project

View file

@ -14,7 +14,7 @@ env:
jobs:
generate-score-tiles:
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
defaults:
run:
working-directory: data/data-pipeline

View file

@ -9,7 +9,7 @@ concurrency:
cancel-in-progress: true
jobs:
build:
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
environment: Staging
defaults:
run:

View file

@ -15,7 +15,7 @@ on:
description: 'Ping Check'
jobs:
check_site_uptime:
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
environment: Staging
name: Ping the site
steps:

View file

@ -11,7 +11,7 @@ jobs:
# JOB to run change detection
detect-be-changes:
name: Detect backend changes
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
# Required permissions
permissions:
pull-requests: read

View file

@ -10,7 +10,7 @@ jobs:
# JOB to run change detection
detect-fe-changes:
name: Detect frontend changes
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
# Required permissions
permissions:
pull-requests: read

View file

@ -12,7 +12,7 @@ $ cd j40-cejst-2
Install [`docker`](https://docs.docker.com/get-docker/). See [Install Docker](INSTALLATION.md#install-docker).
> _Important_: To be able to run the entire application, you may need to increase the memory allocated for docker to at least 8096 MB. See [this post](https://stackoverflow.com/a/44533437) for more details.
> _Important_: To be able to run the entire application, you may need to increase the memory allocated for docker to at least 10 GB. See [this post](https://stackoverflow.com/a/44533437) for more details. If you are using docker to just run the local web server and not running the full data pipeline, then only 4GB of memory is needed for docker.
Use [`docker compose`](https://docs.docker.com/compose/) to run the full application:
@ -25,20 +25,28 @@ The data pipeline container can run the entire data pipeline, or any individual
The data server will make the files created by the data pipeline container available to the web server. The data pipeline container mounts the local repo directories to read and write files. The data server presents the local files to the webserver to render the map and downloadable files.
The web server will run the application website. After it initializes, you should be able to open the web server in your browser at [`http://localhost:8000`](http://localhost:8000). If the data pipeline container is set to run the full data pipeline, the website will not pick up the changes until the pipeline completes.
The web server will run the application website. After it initializes, you should be able to open the web server in your browser at [`http://localhost:8000`](http://localhost:8000).
In order for docker to pick up code changes, the images will need to be rebuilt. If there are code changes in the data folder, the data pipeline image should be rebuilt. If there are code changes in the the client folder, the web server image should be rebuilt. The data server image should never have to be rebuilt.
Previously, the web server became available immediately after launching docker compose. This meant the website could be up before the data pipeline finished scoring and creating the DAC map tiles. The setup has been changed so the web server will not start until the data server has been started, and the data server will not start until the data pipeline finishes whatever start up command it was given.
In order for docker to pick up code changes, the images will need to be rebuilt. If there are code changes in the data folder, the data pipeline image should be rebuilt. If there are code changes in the the client folder, the web server image should be rebuilt. The data server image should rarely ever have to be rebuilt.
Command to rebuild the data pipeline image:
```sh
$ docker build ./data/data-pipeline -t 'j40_data_pipeline'
```
Command to rebuild the data server image:
```sh
$ docker build ./data/data-serve -t 'j40_score_server'
```
Command to rebuild the web server image:
```sh
$ docker build ./client -t 'j40_website'
```
Depending on what code has changed, it may be necessary to clear the cache for the image rebuild. If the image rebuild fails, insert this flag immediately after "build": "--no-cache"
Once one or both images are rebuilt, you can re-run the docker compose command.
Once the required images are rebuilt, you can re-run the docker compose command.

View file

@ -6,8 +6,8 @@
# Feature Tiles env variables:
# The TILES_BASE_URL will be determined by the DATA_SOURCE env variable
GATSBY_CDN_TILES_BASE_URL=https://static-data-screeningtool.geoplatform.gov
GATSBY_LOCAL_TILES_BASE_URL=http://localhost:5000/data/data-pipeline
GATSBY_CDN_TILES_BASE_URL=https://dig0wsohit6js.cloudfront.net
GATSBY_LOCAL_TILES_BASE_URL=http://localhost:5080/data/data-pipeline
GATSBY_DATA_PIPELINE_SCORE_PATH_LOCAL=data_pipeline/data/score
GATSBY_DATA_PIPELINE_TRIBAL_PATH_LOCAL=data_pipeline/data/tribal

View file

@ -1,19 +1,20 @@
FROM node:14
ENV PORT=6000
# Set working directory like 'cd' command, any subsequent instructions in this docker file, will start from
# this working directory
WORKDIR /client
# install all packages as a layer in the docker image / container
COPY package*.json ./
RUN npm ci && npm cache clean --force
# copy all local files from the working directory to the docker image/container however we must use
# dockerignore to ignore node_modules so that the image can use what what was just installed from the above
# step.
COPY . .
# install all packages as a layer in the docker image / container
RUN npm ci
ENV PORT=6000
EXPOSE 6000
CMD [ "npm", "start"]
CMD [ "npm", "start"]

View file

@ -161,24 +161,11 @@ exports[`rendering of the J40Header checks if component renders 1`] = `
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -161,24 +161,11 @@ exports[`rendering of the DatasetContainer checks if various text fields are vis
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -161,24 +161,11 @@ exports[`rendering of the DatasetContainer checks if various text fields are vis
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -161,24 +161,11 @@ exports[`rendering of the DatasetContainer checks if various text fields are vis
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -161,24 +161,11 @@ exports[`rendering of the DatasetContainer checks if various text fields are vis
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -161,24 +161,11 @@ exports[`rendering of the DatasetContainer checks if various text fields are vis
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -161,24 +161,11 @@ exports[`rendering of the Privacy Policy page matches Privacy Policy page snapsh
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -161,24 +161,11 @@ exports[`rendering of the DatasetContainer checks if various text fields are vis
</div>
</div>
<div>
<div
class="usa-alert usa-alert--info"
data-testid="alert"
>
<div
class="usa-alert__body"
>
<h1
class="usa-alert__heading"
>
Version 2.0 of the tool is now available
</h1>
<p
class="usa-alert__text"
>
The Council on Environmental Quality (CEQ) made the 2.0 version of the tool available on Dec 20, 2024.
</p>
</div>
<div>
<strong>
This tool has been updated.
</strong>
The 2.0 version of the tool was released on Dec 20, 2024.
</div>
</div>
<div

View file

@ -1,57 +1,49 @@
FROM ubuntu:22.04
ENV TZ=America/Los_Angeles
FROM ubuntu:24.04
# Install packages
RUN apt-get update && TZ=America/Los_Angeles DEBIAN_FRONTEND=noninteractive apt-get install -y \
build-essential \
make \
gcc \
git \
unzip \
wget \
RUN apt-get update -y && \
apt-get upgrade -y && \
apt-get install -y \
software-properties-common \
libsqlite3-dev \
zlib1g-dev
tippecanoe \
libgdal-dev
# Install python3.10 and dependencies
RUN add-apt-repository ppa:deadsnakes/ppa -y && \
apt-get update -y && \
apt remove python3-cryptography -y && \
apt install -y python3.10-dev && \
apt install -y python3-pip && \
update-alternatives --install /usr/bin/python3 python3 /usr/bin/python3.10 1 && \
update-alternatives --config python3 && \
pip install cryptography && \
pip install cffi && \
pip install openpyxl
# tippecanoe
RUN apt-get update
RUN ln -snf /usr/share/zoneinfo/$TZ /etc/localtime && echo $TZ > /etc/timezone
RUN apt-add-repository -y ppa:git-core/ppa
RUN mkdir -p /tmp/tippecanoe-src && git clone https://github.com/mapbox/tippecanoe.git /tmp/tippecanoe-src
WORKDIR /tmp/tippecanoe-src
RUN /bin/sh -c make && make install
## gdal
RUN add-apt-repository ppa:ubuntugis/ppa
RUN apt-get -y install gdal-bin libgdal-dev
# Install python3.10
RUN add-apt-repository ppa:deadsnakes/ppa
RUN apt install -y python3.10-dev
RUN apt install -y python3-pip
RUN update-alternatives --install /usr/bin/python3 python3 /usr/bin/python3.10 1
RUN update-alternatives --config python3
# Copy all project files into the container
COPY . /data-pipeline
# Set the working directory
WORKDIR /data-pipeline
# Python package installation using poetry. See:
# https://stackoverflow.com/questions/53835198/integrating-python-poetry-with-docker
# Set environment variables
ENV PYTHONFAULTHANDLER=1 \
PYTHONUNBUFFERED=1 \
PYTHONHASHSEED=random \
PIP_NO_CACHE_DIR=off \
PIP_DISABLE_PIP_VERSION_CHECK=on \
PYTHONHASHSEED=0 \
PIP_NO_CACHE_DIR=on \
PIP_DISABLE_PIP_VERSION_CHECK=1 \
PIP_DEFAULT_TIMEOUT=100 \
POETRY_VERSION=1.8.4
POETRY_VERSION=1.8.4
RUN pip install "poetry==$POETRY_VERSION"
RUN poetry config virtualenvs.create false \
&& poetry config virtualenvs.in-project false \
&& poetry install --only main --no-interaction --no-ansi
RUN pip install openpyxl
# Install poetry
RUN apt-get update -y && \
pip install "poetry==$POETRY_VERSION"
# Copy configs and install packages
COPY pyproject.toml poetry.lock ./
RUN poetry config virtualenvs.create false && \
poetry config virtualenvs.in-project false && \
poetry install --only main --no-interaction --no-ansi
# Copy all project files into the container
COPY . .
# Default behavior is to output the options for the base application. This prevents the entire pipeline from running unintentionally.
ENV PIPELINE_CMD="data_pipeline.application --help"

View file

@ -84,6 +84,6 @@ def add_tracts_for_geometries(
df,
tract_data[["GEOID10_TRACT", "geometry"]],
how="inner",
op="intersects",
predicate="intersects",
)
return df

View file

@ -979,47 +979,50 @@ typing = ["typing-extensions (>=4.12.2)"]
[[package]]
name = "fiona"
version = "1.8.22"
version = "1.10.1"
description = "Fiona reads and writes spatial data files"
optional = false
python-versions = "*"
python-versions = ">=3.8"
files = [
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]
[package.dependencies]
numpy = ">=1.14,<3"
[package.extras]
all = ["numpy", "pytest", "pytest-cov"]
docs = ["matplotlib", "numpydoc (==1.1.*)", "sphinx", "sphinx-book-theme", "sphinx-remove-toctrees"]
test = ["pytest", "pytest-cov"]
vectorized = ["numpy"]
[[package]]
name = "six"
@ -5052,4 +5098,4 @@ test = ["mypy", "pre-commit", "pytest", "pytest-asyncio", "websockets (>=10.0)"]
[metadata]
lock-version = "2.0"
python-versions = "^3.10"
content-hash = "2de40c45b54e3d9b7f961d15b5256d77805bef274417644e443ea9b4ca381229"
content-hash = "3410b83dd6d5fd1e2d9e86166d39abd07ff2f5050df5786af789c3e56f2feaa6"

View file

@ -20,7 +20,7 @@ CensusData = "^1.13"
certifi = ">= 2024.07.04" # Due to https://data.safetycli.com/v/72083/f17
click = "8.0.4" # pinning for now per https://github.com/psf/black/issues/2964
dynaconf = "^3.1.4"
geopandas = "^0.11.0"
geopandas = "^1.0.1"
ipdb = "^0.13.9"
ipython = "^8.11.0"
jupyter = "^1.0.0"
@ -40,7 +40,7 @@ us = "^2.0.2"
xlsxwriter = "^2.0.0"
pydantic = "^1.9.0"
Rtree = "^1.0.0"
fiona = "~1.8.21"
fiona = "^1.10.1"
tenacity = ">=5.0.2"
pyarrow = "^18.1.0"

View file

@ -1,3 +1,4 @@
FROM node:latest
FROM node:23-slim
RUN apt-get update -y
RUN npm install -g http-server
CMD http-server ./ --cors
CMD ["http-server", "./", "--cors"]

View file

@ -20,14 +20,17 @@ services:
j40_score_server:
image: j40_score_server
container_name: j40_score_server_1
build: data/data-serve/.
build: data/data-serve
volumes:
- ./data/data-pipeline/data_pipeline/data/score:/data/data-pipeline/data_pipeline/data/score
- ./data/data-pipeline/data_pipeline/data/tribal:/data/data-pipeline/data_pipeline/data/tribal
ports:
- 5000:8080
- 5080:8080
environment:
TZ: America/Los_Angeles
depends_on:
score:
condition: service_completed_successfully
#The j40_website service runs the web app / map / site
j40_website:
@ -44,4 +47,5 @@ services:
ports:
- 8000:6000
depends_on:
- "j40_score_server"
j40_score_server:
condition: service_started